Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylmenaquinone methyltransferase | RT97_15735 | Not Available | Negative | 3380227 - 3381015 | 28229.1 |
| hypothetical protein | RT97_15740 | Not Available | Positive | 3381132 - 3381857 | 25983.7 |
| phosphoribosylamine--glycine ligase | RT97_15745 | Not Available | Positive | 3381912 - 3383210 | 46393.5 |
| coproporphyrinogen-iii oxidase, aerobic | RT97_15750 | Not Available | Positive | 3383210 - 3384127 | 34199.5 |
| nicotinate-nucleotide adenylyltransferase | RT97_15755 | Not Available | Positive | 3384124 - 3384753 | 22452.0 |
| iojap family protein | RT97_15760 | Not Available | Positive | 3384753 - 3385433 | 24174.0 |
| 50s rrna methyltransferase | RT97_15765 | Not Available | Positive | 3385430 - 3385897 | 17237.8 |
| hypothetical protein | RT97_15770 | Not Available | Positive | 3385894 - 3386574 | 24006.0 |
| septum formation inhibitor maf | RT97_15775 | Not Available | Positive | 3386577 - 3387179 | 21244.7 |
| ribonuclease | RT97_15780 | Not Available | Positive | 3387187 - 3388713 | 56191.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
