Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate transporter subunit | RT97_15680 | Not Available | Positive | 3368130 - 3369146 | 36357.1 |
| sulfate transporter | RT97_15685 | Not Available | Positive | 3369283 - 3370170 | 31366.3 |
| sulfate abc transporter permease | RT97_15690 | Not Available | Positive | 3370303 - 3371205 | 32561.3 |
| sulfate abc transporter atp-binding protein | RT97_15695 | Not Available | Positive | 3371221 - 3372318 | 40522.4 |
| disulfide bond formation protein b | RT97_15700 | Not Available | Positive | 3372315 - 3372818 | 18374.1 |
| hemolysin secretion protein d | RT97_15705 | Not Available | Positive | 3373022 - 3374185 | 42027.7 |
| macrolide transporter | RT97_15710 | Not Available | Positive | 3374182 - 3376164 | 71008.3 |
| glycosyl transferase family 2 | RT97_15720 | Not Available | Negative | 3377602 - 3378378 | 28670.7 |
| acyltransferase | RT97_15725 | Not Available | Negative | 3378345 - 3379142 | 29686.1 |
| endoribonuclease l-psp | RT97_15730 | Not Available | Negative | 3379190 - 3380224 | 37105.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
