Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydropantoate 2-reductase | RT97_15625 | Not Available | Negative | 3358657 - 3359598 | 32907.5 |
| methyltryptophan oxidase | RT97_15630 | Not Available | Negative | 3359662 - 3360882 | 44174.0 |
| abc transporter substrate-binding protein | RT97_15635 | Not Available | Negative | 3360896 - 3361879 | 34882.9 |
| amino acid abc transporter substrate-binding protein | RT97_15640 | Not Available | Positive | 3362107 - 3362910 | 28886.6 |
| amino acid abc transporter permease | RT97_15645 | Not Available | Positive | 3362936 - 3363637 | 24983.8 |
| nadph-dependent fmn reductase | RT97_15655 | Not Available | Positive | 3364421 - 3364978 | 20065.9 |
| fmn-dependent nadh-azoreductase | RT97_15660 | Not Available | Negative | 3365050 - 3365697 | 22705.9 |
| lysr family transcriptional regulator | RT97_15665 | Not Available | Positive | 3365831 - 3366745 | 33040.3 |
| peroxidase | RT97_15670 | Not Available | Positive | 3366894 - 3367535 | 23511.8 |
| alpha/beta hydrolase | RT97_15675 | Not Available | Positive | 3367558 - 3368133 | 20517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
