Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonic semialdehyde reductase | RT97_15575 | Not Available | Positive | 3350196 - 3350792 | 21682.8 |
| transporter | RT97_15580 | Not Available | Positive | 3350844 - 3351059 | 7741.44 |
| hypothetical protein | RT97_15585 | Not Available | Negative | 3351118 - 3351564 | 16962.4 |
| rhodanese | RT97_15590 | Not Available | Positive | 3351756 - 3352235 | 17256.4 |
| serine acetyltransferase | RT97_15595 | Not Available | Positive | 3352287 - 3353201 | 32874.4 |
| transcription factor | RT97_15600 | Not Available | Positive | 3353198 - 3353467 | 9927.01 |
| membrane protein | RT97_15605 | Not Available | Positive | 3353568 - 3354500 | 34405.0 |
| cysteine desulfurase | RT97_15610 | Not Available | Positive | 3354612 - 3356462 | 64840.0 |
| hydroxylase | RT97_15615 | Not Available | Positive | 3356575 - 3357933 | 50709.4 |
| asp/glu/hydantoin racemase | RT97_15620 | Not Available | Negative | 3357941 - 3358651 | 23986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
