Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybutyrate coa-transferase | RT97_15470 | Not Available | Positive | 3328396 - 3329691 | 46376.6 |
| methionine sulfoxide reductase a | RT97_15475 | Not Available | Negative | 3329701 - 3330402 | 25104.6 |
| pentapeptide mxkdx repeat protein | RT97_15480 | Not Available | Negative | 3330496 - 3330732 | 8331.27 |
| molybdopterin-binding protein | RT97_15485 | Not Available | Negative | 3330809 - 3331600 | 29533.3 |
| chemotaxis protein chey | RT97_15495 | Not Available | Positive | 3332470 - 3333204 | 27388.0 |
| histidine kinase | RT97_15500 | Not Available | Positive | 3333201 - 3334700 | 53934.5 |
| enoyl-coa hydratase | RT97_15505 | Not Available | Positive | 3334790 - 3335734 | 34746.6 |
| alpha/beta hydrolase | RT97_15510 | Not Available | Negative | 3335759 - 3337270 | 52717.1 |
| transglutaminase | RT97_15515 | Not Available | Negative | 3337468 - 3338367 | 33191.3 |
| fad-dependent cmnm(5)s(2)u34 oxidoreductase | RT97_15520 | Not Available | Negative | 3338563 - 3340395 | 65267.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
