Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_15415 | Not Available | Positive | 3318755 - 3319105 | 12338.4 |
| extensin | RT97_15420 | Not Available | Negative | 3319115 - 3319801 | 24467.1 |
| phenylacetic acid degradation protein | RT97_15430 | Not Available | Negative | 3320926 - 3321351 | 14838.9 |
| gcn5 family acetyltransferase | RT97_15435 | Not Available | Negative | 3321366 - 3321818 | 16663.0 |
| aldo/keto reductase | RT97_15440 | Not Available | Positive | 3321942 - 3322970 | 37390.4 |
| lysr family transcriptional regulator | RT97_15445 | Not Available | Negative | 3322977 - 3323870 | 33502.0 |
| branched-chain amino acid abc transporter substrate-binding protein | RT97_15450 | Not Available | Positive | 3324089 - 3325204 | 39052.9 |
| hypothetical protein | RT97_15455 | Not Available | Positive | 3325216 - 3326121 | 31554.8 |
| fad-dependent oxidoreductase | RT97_15460 | Not Available | Positive | 3326141 - 3327313 | 42569.5 |
| fructose-bisphosphate aldolase | RT97_15465 | Not Available | Positive | 3327361 - 3328386 | 35864.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
