Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_15365 | Not Available | Positive | 3307198 - 3308064 | 29509.1 |
| hypothetical protein | RT97_15370 | Not Available | Positive | 3308081 - 3308401 | 11506.9 |
| d-aminopeptidase | RT97_15375 | Not Available | Negative | 3308876 - 3309697 | 29162.0 |
| d-aminopeptidase | RT97_15380 | Not Available | Negative | 3309694 - 3310776 | 37312.5 |
| glutathione abc transporter permease | RT97_15385 | Not Available | Negative | 3310787 - 3311713 | 33310.9 |
| glutathione abc transporter permease | RT97_15390 | Not Available | Negative | 3311724 - 3312644 | 34040.7 |
| glutathione abc transporter substrate-binding protein | RT97_15395 | Not Available | Negative | 3312725 - 3314278 | 57288.5 |
| glutathione abc transporter atp-binding protein | RT97_15400 | Not Available | Negative | 3314335 - 3316212 | 68420.4 |
| isoaspartyl peptidase | RT97_15405 | Not Available | Negative | 3316242 - 3317198 | 32782.9 |
| transcriptional regulator | RT97_15410 | Not Available | Negative | 3317195 - 3318181 | 34756.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
