Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | RT97_01430 | Not Available | Negative | 313220 - 316447 | 115969.0 |
| cytochrome c peroxidase | RT97_01435 | Not Available | Negative | 316457 - 317854 | 49722.6 |
| cobalt-zinc-cadmium resistance protein | RT97_01440 | Not Available | Negative | 317872 - 319221 | 47606.5 |
| hypothetical protein | RT97_01445 | Not Available | Negative | 319317 - 319691 | 13604.0 |
| transcriptional regulator | RT97_01450 | Not Available | Positive | 319852 - 320529 | 25688.3 |
| histidine kinase | RT97_01455 | Not Available | Positive | 320627 - 321946 | 48069.9 |
| na+/h+-exchanging protein | RT97_01460 | Not Available | Negative | 322148 - 323422 | 44300.2 |
| hypothetical protein | RT97_01470 | Not Available | Negative | 326021 - 326392 | 12702.3 |
| transcriptional regulator | RT97_01475 | Not Available | Positive | 326544 - 327284 | 27674.3 |
| hypothetical protein | RT97_01480 | Not Available | Negative | 327292 - 328749 | 50837.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
