Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_15315 | Not Available | Positive | 3295337 - 3296080 | 26382.6 |
| type vi secretion protein | RT97_15320 | Not Available | Positive | 3296113 - 3296499 | 13479.7 |
| hypothetical protein | RT97_15325 | Not Available | Negative | 3296516 - 3297865 | 48421.6 |
| hypothetical protein | RT97_15330 | Not Available | Negative | 3297922 - 3299295 | 49099.6 |
| mfs transporter | RT97_15335 | Not Available | Negative | 3299557 - 3300537 | 34365.6 |
| phospholipase | RT97_15340 | Not Available | Negative | 3300646 - 3301743 | 41021.0 |
| transcription accessory protein | RT97_15345 | Not Available | Negative | 3301789 - 3304164 | 86342.1 |
| histidine kinase | RT97_15350 | Not Available | Negative | 3304244 - 3305215 | 35174.0 |
| luxr family transcriptional regulator | RT97_15355 | Not Available | Negative | 3305252 - 3306046 | 29091.0 |
| hypothetical protein | RT97_15360 | Not Available | Positive | 3306431 - 3307120 | 20472.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
