Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | RT97_15210 | Not Available | Negative | 3273619 - 3275796 | 77090.9 |
| hypothetical protein | RT97_15215 | Not Available | Negative | 3275793 - 3276278 | 16860.6 |
| hypothetical protein | RT97_15220 | Not Available | Positive | 3276530 - 3277084 | 19770.5 |
| cupin | RT97_15225 | Not Available | Negative | 3277106 - 3277492 | 14153.0 |
| signal peptide protein | RT97_15230 | Not Available | Negative | 3277845 - 3278327 | 17799.7 |
| hypothetical protein | RT97_15235 | Not Available | Negative | 3278432 - 3278644 | 7257.8 |
| ankyrin | RT97_15240 | Not Available | Negative | 3278638 - 3279315 | 24330.4 |
| dnaase | RT97_15245 | Not Available | Negative | 3279312 - 3280118 | 29854.2 |
| pilus assembly protein pilz | RT97_15250 | Not Available | Negative | 3280238 - 3280627 | 13658.5 |
| dna polymerase | RT97_15255 | Not Available | Negative | 3280624 - 3281640 | 36133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
