Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase | RT97_15070 | Not Available | Negative | 3246085 - 3246639 | 20267.1 |
| hypothetical protein | RT97_15075 | Not Available | Positive | 3246810 - 3247265 | 16301.6 |
| hypothetical protein | RT97_15080 | Not Available | Positive | 3247413 - 3248810 | 48659.5 |
| dimethylallyltransferase | RT97_15090 | Not Available | Negative | 3249847 - 3250524 | 24470.1 |
| methionine sulfoxide reductase b | RT97_15095 | Not Available | Positive | 3250786 - 3251235 | 16545.2 |
| methionine sulfoxide reductase a | RT97_15100 | Not Available | Positive | 3251232 - 3251750 | 19238.4 |
| alpha/beta hydrolase | RT97_15110 | Not Available | Negative | 3252467 - 3253411 | 35352.5 |
| porin | RT97_15115 | Not Available | Positive | 3253663 - 3254955 | 47339.5 |
| alpha/beta hydrolase | RT97_15120 | Not Available | Negative | 3255000 - 3256031 | 37027.2 |
| glyoxalase/bleomycin resistance protein/dioxygenase | RT97_15130 | Not Available | Negative | 3256914 - 3257102 | 6973.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
