Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_15015 | Not Available | Positive | 3234094 - 3234768 | 22295.3 |
| deor faimly transcriptional regulator | RT97_15020 | Not Available | Negative | 3234778 - 3235218 | 16293.7 |
| fad-linked oxidase | RT97_15025 | Not Available | Negative | 3235215 - 3239093 | 142401.0 |
| 3-phosphoglycerate dehydrogenase | RT97_15030 | Not Available | Negative | 3239273 - 3240505 | 43773.9 |
| glycerol-3-phosphate abc transporter substrate-binding protein | RT97_15035 | Not Available | Positive | 3240732 - 3242045 | 47837.7 |
| glycerol-3-phosphate transporter permease | RT97_15040 | Not Available | Positive | 3242144 - 3243025 | 32626.4 |
| glycerol-3-phosphate transporter membrane protein | RT97_15045 | Not Available | Positive | 3243065 - 3243916 | 31287.2 |
| nadph-dependent fmn reductase | RT97_15050 | Not Available | Negative | 3243958 - 3244154 | 6671.86 |
| hypothetical protein | RT97_15060 | Not Available | Positive | 3244834 - 3245367 | 19780.3 |
| isochorismatase | RT97_15065 | Not Available | Positive | 3245394 - 3246029 | 23755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
