Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_14915 | Not Available | Positive | 3218266 - 3218649 | 13159.1 |
| hypothetical protein | RT97_14920 | Not Available | Positive | 3218636 - 3219139 | 18310.7 |
| bacterioferritin | RT97_14925 | Not Available | Positive | 3219136 - 3219696 | 20560.0 |
| transporter | RT97_14930 | Not Available | Negative | 3219782 - 3220300 | 17017.0 |
| general stress protein csbd | RT97_14935 | Not Available | Negative | 3220388 - 3220585 | 6829.14 |
| hypothetical protein | RT97_14940 | Not Available | Negative | 3220707 - 3221531 | 29537.7 |
| membrane protein | RT97_14945 | Not Available | Negative | 3221536 - 3222417 | 31368.2 |
| blue light sensor protein | RT97_14950 | Not Available | Negative | 3222509 - 3222931 | 15313.5 |
| gtp cyclohydrolase | RT97_14955 | Not Available | Negative | 3222934 - 3223665 | 27629.6 |
| endonuclease | RT97_14960 | Not Available | Negative | 3223739 - 3224506 | 28528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
