Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | RT97_14865 | Not Available | Negative | 3209046 - 3209453 | 14365.7 |
| phosphoglyceromutase | RT97_14870 | Not Available | Positive | 3209535 - 3210278 | 27686.8 |
| peptidase s41 | RT97_14875 | Not Available | Positive | 3210385 - 3211827 | 52294.6 |
| molybdopterin biosynthesis protein moeb | RT97_14880 | Not Available | Positive | 3211895 - 3212671 | 27102.4 |
| membrane assembly protein asma | RT97_14885 | Not Available | Negative | 3212668 - 3214680 | 70608.7 |
| chemotaxis protein chey | RT97_14890 | Not Available | Positive | 3214919 - 3215329 | 14914.8 |
| luxr family transcriptional regulator | RT97_14895 | Not Available | Negative | 3215337 - 3215969 | 23250.2 |
| histidine kinase | RT97_14900 | Not Available | Positive | 3216100 - 3217419 | 48584.7 |
| membrane protein | RT97_14905 | Not Available | Positive | 3217628 - 3217792 | 5619.37 |
| hypothetical protein | RT97_14910 | Not Available | Positive | 3217850 - 3218227 | 13283.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
