Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_14815 | Not Available | Negative | 3199887 - 3200786 | 31875.4 |
| glyoxalase | RT97_14820 | Not Available | Negative | 3200821 - 3201201 | 14257.9 |
| hemin receptor | RT97_14825 | Not Available | Negative | 3201198 - 3202280 | 39235.7 |
| tonb-dependent receptor | RT97_14830 | Not Available | Negative | 3202319 - 3204532 | 81464.7 |
| alkyl hydroperoxide reductase | RT97_14835 | Not Available | Negative | 3204693 - 3205021 | 11299.6 |
| quinolinate synthetase | RT97_14840 | Not Available | Negative | 3205097 - 3206215 | 39725.6 |
| nicotinate-nucleotide pyrophosphorylase | RT97_14845 | Not Available | Negative | 3206222 - 3207100 | 30858.0 |
| glycerol-3-phosphate dehydrogenase | RT97_14850 | Not Available | Negative | 3207121 - 3208155 | 35008.3 |
| protein-export protein secb | RT97_14855 | Not Available | Negative | 3208181 - 3208645 | 16871.2 |
| glutaredoxin | RT97_14860 | Not Available | Negative | 3208764 - 3209024 | 9524.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
