Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | RT97_01375 | Not Available | Negative | 302192 - 303241 | 36769.6 |
| transporter | RT97_01385 | Not Available | Positive | 304220 - 305455 | 42849.6 |
| arac family transcriptional regulator | RT97_01390 | Not Available | Negative | 305460 - 306410 | 35935.7 |
| peptidase pmba | RT97_01395 | Not Available | Negative | 306474 - 307844 | 48517.1 |
| ribosome-associated protein | RT97_01400 | Not Available | Positive | 307962 - 308618 | 24417.9 |
| molybdenum cofactor biosynthesis protein moga | RT97_01405 | Not Available | Positive | 308615 - 309205 | 20896.4 |
| cupin | RT97_01410 | Not Available | Negative | 309212 - 309619 | 14195.5 |
| nmra family transcriptional regulator | RT97_01415 | Not Available | Negative | 309686 - 310438 | 26009.0 |
| hypothetical protein | RT97_01420 | Not Available | Negative | 310633 - 312057 | 46256.5 |
| cation transporter | RT97_01425 | Not Available | Negative | 312313 - 313230 | 32934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
