Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase | RT97_14765 | Not Available | Negative | 3190675 - 3192081 | 51462.5 |
| 50s ribosomal protein l9 | RT97_14770 | Not Available | Negative | 3192335 - 3192787 | 15807.2 |
| 30s ribosomal protein s18 | RT97_14775 | Not Available | Negative | 3192800 - 3193081 | 11040.5 |
| single-stranded dna-binding protein | RT97_14780 | Not Available | Negative | 3193103 - 3193417 | 11065.3 |
| 30s ribosomal protein s6 | RT97_14785 | Not Available | Negative | 3193422 - 3193796 | 14261.1 |
| hypothetical protein | RT97_14790 | Not Available | Negative | 3193913 - 3194404 | 16972.5 |
| phosphoenolpyruvate synthase | RT97_14795 | Not Available | Negative | 3194538 - 3196931 | 86668.8 |
| pep synthetase regulatory protein | RT97_14800 | Not Available | Positive | 3197123 - 3197944 | 30877.2 |
| abc transporter | RT97_14805 | Not Available | Negative | 3197988 - 3198782 | 27749.4 |
| abc transporter permease | RT97_14810 | Not Available | Negative | 3198794 - 3199900 | 37753.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
