Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | RT97_14715 | Not Available | Negative | 3182202 - 3183524 | 46586.7 |
| aminotransferase | RT97_14720 | Not Available | Negative | 3183620 - 3184852 | 45438.7 |
| hypothetical protein | RT97_14725 | Not Available | Positive | 3184952 - 3185335 | 13777.3 |
| peroxiredoxin | RT97_14730 | Not Available | Positive | 3185471 - 3185947 | 17580.5 |
| phoh protein | RT97_14735 | Not Available | Positive | 3186168 - 3187955 | 64623.9 |
| glyoxalase | RT97_14740 | Not Available | Positive | 3188113 - 3188484 | 12749.3 |
| hypothetical protein | RT97_14745 | Not Available | Positive | 3188491 - 3188940 | 16473.9 |
| transcriptional regulator | RT97_14750 | Not Available | Positive | 3188993 - 3189451 | 16922.5 |
| 6-o-methylguanine dna methyltransferase | RT97_14755 | Not Available | Positive | 3189454 - 3189912 | 17007.5 |
| deor faimly transcriptional regulator | RT97_14760 | Not Available | Positive | 3189912 - 3190658 | 27533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
