Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | RT97_14665 | Not Available | Negative | 3171671 - 3172855 | 40767.2 |
| hypothetical protein | RT97_14670 | Not Available | Negative | 3172968 - 3173312 | 12257.0 |
| protein disaggregation chaperone | RT97_14675 | Not Available | Negative | 3173319 - 3175940 | 95941.3 |
| twin-arginine translocation pathway signal | RT97_14680 | Not Available | Positive | 3176082 - 3177077 | 35057.7 |
| molybdenum cofactor biosynthesis protein moae | RT97_14685 | Not Available | Negative | 3177074 - 3177550 | 17466.9 |
| dihydrodipicolinate synthase | RT97_14690 | Not Available | Positive | 3177805 - 3178701 | 31539.1 |
| molybdenum cofactor biosynthesis protein moad | RT97_14695 | Not Available | Negative | 3178688 - 3178939 | 8817.51 |
| molybdenum cofactor biosynthesis protein moaa | RT97_14700 | Not Available | Negative | 3178947 - 3180233 | 44970.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | RT97_14705 | Not Available | Negative | 3180226 - 3180771 | 20308.2 |
| threonine synthase | RT97_14710 | Not Available | Negative | 3180790 - 3182205 | 51935.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
