Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine-binding protein | RT97_14565 | Not Available | Positive | 3151838 - 3152080 | 8755.42 |
| beta-ketoacyl synthase | RT97_14570 | Not Available | Positive | 3152077 - 3153291 | 41765.8 |
| lysr family transcriptional regulator | RT97_14575 | Not Available | Negative | 3153288 - 3154193 | 32863.7 |
| peptidase m20 | RT97_14580 | Not Available | Positive | 3154323 - 3155681 | 47531.4 |
| hypothetical protein | RT97_14585 | Not Available | Positive | 3155763 - 3156200 | 14759.8 |
| sulfate transporter | RT97_14590 | Not Available | Positive | 3156311 - 3158002 | 59415.9 |
| lysr family transcriptional regulator | RT97_14595 | Not Available | Positive | 3158022 - 3158915 | 32769.5 |
| hypothetical protein | RT97_14600 | Not Available | Negative | 3158925 - 3159512 | 20783.0 |
| hypothetical protein | RT97_14605 | Not Available | Positive | 3159632 - 3160159 | 18452.0 |
| 3-hydroxybutyryl-coa dehydratase | RT97_14610 | Not Available | Negative | 3160163 - 3160909 | 26825.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
