Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | RT97_14515 | Not Available | Negative | 3142094 - 3142927 | 30167.5 |
| phosphonate abc transporter substrate-binding protein | RT97_14520 | Not Available | Negative | 3142924 - 3143787 | 31257.8 |
| lysr family transcriptional regulator | RT97_14525 | Not Available | Positive | 3144040 - 3144924 | 32904.9 |
| recombinase xerd | RT97_14530 | Not Available | Negative | 3144937 - 3145848 | 33707.9 |
| abc transporter substrate-binding protein | RT97_14535 | Not Available | Negative | 3145916 - 3146890 | 34090.3 |
| transporter | RT97_14540 | Not Available | Positive | 3147009 - 3147926 | 32333.4 |
| permease | RT97_14545 | Not Available | Negative | 3147928 - 3148677 | 25974.0 |
| mfs transporter | RT97_14550 | Not Available | Negative | 3148736 - 3149995 | 43456.8 |
| arac family transcriptional regulator | RT97_14555 | Not Available | Positive | 3150085 - 3150936 | 31370.9 |
| pa-phosphatase | RT97_14560 | Not Available | Positive | 3151031 - 3151741 | 26053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
