Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydratase | RT97_14465 | Not Available | Negative | 3132285 - 3132728 | 16074.2 |
| acetyl-coa acetyltransferase | RT97_14470 | Not Available | Negative | 3132811 - 3133944 | 38662.6 |
| tetr family transcriptional regulator | RT97_14475 | Not Available | Negative | 3134039 - 3134635 | 21221.2 |
| abc transporter substrate-binding protein | RT97_14480 | Not Available | Negative | 3134687 - 3135667 | 33239.0 |
| abc transporter substrate-binding protein | RT97_14485 | Not Available | Negative | 3135679 - 3136647 | 33893.0 |
| hypothetical protein | RT97_14490 | Not Available | Negative | 3136669 - 3137394 | 26799.0 |
| deor faimly transcriptional regulator | RT97_14495 | Not Available | Negative | 3137443 - 3138900 | 53249.7 |
| alcohol dehydrogenase | RT97_14500 | Not Available | Negative | 3138897 - 3140000 | 39297.4 |
| phosphonoacetate hydrolase | RT97_14505 | Not Available | Negative | 3140011 - 3141279 | 44507.4 |
| phosphate abc transporter permease | RT97_14510 | Not Available | Negative | 3141276 - 3142097 | 29557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
