Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | RT97_14410 | Not Available | Positive | 3118998 - 3119669 | 24263.7 |
| hypothetical protein | RT97_14415 | Not Available | Positive | 3119701 - 3120675 | 35257.1 |
| arac family transcriptional regulator | RT97_14420 | Not Available | Negative | 3120682 - 3121509 | 29923.1 |
| short-chain dehydrogenase | RT97_14425 | Not Available | Positive | 3121649 - 3122416 | 26487.7 |
| 3-hydroxyisobutyrate dehydrogenase | RT97_14430 | Not Available | Positive | 3122442 - 3123296 | 29649.0 |
| hypothetical protein | RT97_14435 | Not Available | Negative | 3123348 - 3123896 | 19945.6 |
| hsp33 chaperonin | RT97_14445 | Not Available | Negative | 3129170 - 3130168 | 36264.6 |
| hypothetical protein | RT97_14450 | Not Available | Negative | 3130200 - 3130724 | 18373.9 |
| hypothetical protein | RT97_14455 | Not Available | Positive | 3130762 - 3131574 | 29995.7 |
| pentapeptide repeat protein | RT97_14460 | Not Available | Positive | 3131571 - 3132275 | 25750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
