Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_14360 | Not Available | Negative | 3110921 - 3111421 | 17322.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | RT97_14365 | Not Available | Negative | 3111604 - 3112050 | 15852.2 |
| hypothetical protein | RT97_14370 | Not Available | Negative | 3112054 - 3112497 | 15582.8 |
| phosphopantothenate synthase | RT97_14375 | Not Available | Negative | 3112497 - 3113720 | 43647.0 |
| ctp synthetase | RT97_14380 | Not Available | Positive | 3113844 - 3115523 | 61591.6 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | RT97_14385 | Not Available | Positive | 3115520 - 3116377 | 30571.9 |
| hypothetical protein | RT97_14390 | Not Available | Positive | 3116374 - 3116664 | 10675.8 |
| enolase | RT97_14395 | Not Available | Positive | 3116691 - 3117974 | 45675.2 |
| septation ring formation regulator ezra | RT97_14400 | Not Available | Positive | 3118071 - 3118349 | 10393.7 |
| transporter | RT97_14405 | Not Available | Positive | 3118372 - 3118992 | 22817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
