Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail sheath protein | RT97_01315 | Not Available | Positive | 281850 - 283217 | 49049.0 |
| phage tail protein | RT97_01320 | Not Available | Positive | 283256 - 283690 | 16256.4 |
| glycerol acyltransferase | RT97_01325 | Not Available | Positive | 283714 - 284154 | 16556.8 |
| hypothetical protein | RT97_01330 | Not Available | Positive | 284669 - 285337 | 24126.8 |
| hypothetical protein | RT97_01335 | Not Available | Positive | 285415 - 287082 | 58197.9 |
| hypothetical protein | RT97_01340 | Not Available | Positive | 287086 - 287526 | 16391.8 |
| hypothetical protein | RT97_01345 | Not Available | Positive | 287528 - 290668 | 110673.0 |
| hypothetical protein | RT97_01355 | Not Available | Positive | 293436 - 296216 | 100656.0 |
| hypothetical protein | RT97_01360 | Not Available | Positive | 296218 - 297720 | 54765.2 |
| atpase aaa | RT97_01365 | Not Available | Positive | 297732 - 299096 | 49848.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
