Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_14260 | Not Available | Positive | 3089917 - 3091629 | 64706.1 |
| metallophosphoesterase | RT97_14265 | Not Available | Positive | 3091639 - 3092376 | 26363.1 |
| isochorismatase | RT97_14270 | Not Available | Negative | 3092380 - 3092916 | 19399.9 |
| hypothetical protein | RT97_14275 | Not Available | Negative | 3092921 - 3093334 | 14208.0 |
| hypothetical protein | RT97_14280 | Not Available | Negative | 3093392 - 3094981 | 58637.4 |
| beta-lactamase | RT97_14285 | Not Available | Positive | 3095190 - 3096311 | 41621.1 |
| hypothetical protein | RT97_14290 | Not Available | Negative | 3096329 - 3096520 | 7121.85 |
| dna topoisomerase iv subunit a | RT97_14295 | Not Available | Negative | 3096520 - 3098922 | 86450.6 |
| galactose oxidase | RT97_14300 | Not Available | Negative | 3098975 - 3100096 | 39901.1 |
| lytic transglycosylase | RT97_14305 | Not Available | Negative | 3100110 - 3100991 | 31117.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
