Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination protein nusg | RT97_14210 | Not Available | Negative | 3082516 - 3083118 | 22765.0 |
| preprotein translocase subunit sece | RT97_14215 | Not Available | Negative | 3083122 - 3083505 | 14006.2 |
| Trna-trp | Not Available | Not Available | Positive | 3083640 - 3083715 | Not Available |
| bifunctional glyoxylate/hydroxypyruvate reductase b | RT97_14225 | Not Available | Negative | 3083984 - 3084964 | 34731.0 |
| 2-dehydro-3-deoxygluconokinase | RT97_14230 | Not Available | Negative | 3084966 - 3085919 | 33712.1 |
| glutamine abc transporter atp-binding protein | RT97_14235 | Not Available | Negative | 3085928 - 3086671 | 26557.8 |
| glutamine abc transporter atp-binding protein | RT97_14240 | Not Available | Negative | 3086671 - 3087426 | 27866.1 |
| abc transporter substrate-binding protein | RT97_14245 | Not Available | Negative | 3087573 - 3088370 | 28209.1 |
| amino acid abc transporter permease | RT97_14250 | Not Available | Negative | 3088432 - 3089085 | 23556.5 |
| abc transporter permease | RT97_14255 | Not Available | Negative | 3089111 - 3089782 | 24868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
