Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein | RT97_14060 | Not Available | Positive | 3044255 - 3044776 | 17787.2 |
| permease | RT97_14065 | Not Available | Negative | 3044796 - 3045677 | 30438.3 |
| lysr family transcriptional regulator | RT97_14070 | Not Available | Positive | 3045771 - 3046646 | 31320.9 |
| hypothetical protein | RT97_14075 | Not Available | Negative | 3046659 - 3047663 | 35560.5 |
| citryl-coa lyase | RT97_14080 | Not Available | Negative | 3047709 - 3048566 | 29546.7 |
| coa-transferase | RT97_14085 | Not Available | Negative | 3048563 - 3049744 | 42209.4 |
| acyl-coa dehydrogenase | RT97_14090 | Not Available | Negative | 3049761 - 3050660 | 33096.2 |
| laci family transcriptional regulator | RT97_14095 | Not Available | Negative | 3050791 - 3051768 | 33718.9 |
| lysr family transcriptional regulator | RT97_14100 | Not Available | Positive | 3051875 - 3052810 | 34427.8 |
| s-transferase | RT97_14105 | Not Available | Negative | 3052999 - 3053874 | 32366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
