Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobn | RT97_14005 | Not Available | Negative | 3028630 - 3032442 | 137828.0 |
| cobalamin biosynthesis protein cobw | RT97_14010 | Not Available | Negative | 3032455 - 3033519 | 38710.1 |
| cobalt transporter | RT97_14015 | Not Available | Negative | 3033631 - 3034308 | 23881.5 |
| peptidase | RT97_14020 | Not Available | Negative | 3034381 - 3035919 | 57394.8 |
| tonb-dependent receptor | RT97_14025 | Not Available | Negative | 3035931 - 3038123 | 78749.1 |
| hypothetical protein | RT97_14035 | Not Available | Positive | 3038998 - 3039402 | 14535.3 |
| sodium:proton antiporter | RT97_14040 | Not Available | Negative | 3039417 - 3041126 | 59956.5 |
| c4-dicarboxylate transporter | RT97_14045 | Not Available | Negative | 3041204 - 3042547 | 47635.6 |
| 3-ketoacyl-acp reductase | RT97_14050 | Not Available | Negative | 3042676 - 3043413 | 25945.0 |
| thiamine biosynthesis protein thij | RT97_14055 | Not Available | Positive | 3043608 - 3044258 | 23184.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
