Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_13940 | Not Available | Negative | 3016532 - 3017626 | 41045.1 |
| hypothetical protein | RT97_13945 | Not Available | Negative | 3017997 - 3018212 | 7855.51 |
| hypothetical protein | RT97_13960 | Not Available | Positive | 3020807 - 3021904 | 40563.6 |
| kinase | RT97_13965 | Not Available | Positive | 3021901 - 3022752 | 31831.2 |
| abc transporter substrate-binding protein | RT97_13970 | Not Available | Positive | 3022847 - 3023719 | 30740.4 |
| histidine kinase | RT97_13975 | Not Available | Positive | 3023833 - 3024999 | 41925.1 |
| hypothetical protein | RT97_13980 | Not Available | Positive | 3025025 - 3025882 | 30430.5 |
| hypothetical protein | RT97_13990 | Not Available | Negative | 3026446 - 3026739 | 10810.1 |
| von willebrand factor type a | RT97_13995 | Not Available | Negative | 3026901 - 3027326 | 15677.7 |
| magnesium chelatase | RT97_14000 | Not Available | Negative | 3027551 - 3028633 | 37446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
