Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase | RT97_13870 | Not Available | Negative | 3000824 - 3001630 | 28807.2 |
| multidrug transporter | RT97_13875 | Not Available | Negative | 3001631 - 3001966 | 11709.5 |
| 3-oxoadipate enol-lactonase | RT97_13880 | Not Available | Negative | 3001997 - 3002791 | 28662.6 |
| transcriptional regulator | RT97_13885 | Not Available | Positive | 3002896 - 3003846 | 35656.4 |
| cupin | RT97_13890 | Not Available | Negative | 3003853 - 3004386 | 18259.0 |
| dtdp-glucose 4,6-dehydratase | RT97_13895 | Not Available | Negative | 3004383 - 3005126 | 25976.2 |
| dna-binding protein | RT97_13900 | Not Available | Positive | 3005218 - 3006660 | 51798.4 |
| hypothetical protein | RT97_13905 | Not Available | Positive | 3007123 - 3008079 | 34882.8 |
| aminotransferase | RT97_13915 | Not Available | Positive | 3009338 - 3010459 | 41244.6 |
| hypothetical protein | RT97_13930 | Not Available | Positive | 3012259 - 3012978 | 26925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
