Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_13815 | Not Available | Positive | 2992107 - 2993018 | 33394.6 |
| hypothetical protein | RT97_13820 | Not Available | Negative | 2993105 - 2993770 | 24113.2 |
| laci family transcriptional regulator | RT97_13825 | Not Available | Positive | 2994057 - 2995091 | 36967.6 |
| ap endonuclease | RT97_13830 | Not Available | Positive | 2995145 - 2996221 | 40374.6 |
| abc transporter substrate-binding protein | RT97_13835 | Not Available | Positive | 2996265 - 2997224 | 34121.2 |
| padr family transcriptional regulator | RT97_13845 | Not Available | Negative | 2998113 - 2998487 | 13874.9 |
| chaperone | RT97_13850 | Not Available | Positive | 2998614 - 2998931 | 10826.7 |
| acp phosphodiesterase | RT97_13855 | Not Available | Positive | 2998949 - 2999587 | 23750.3 |
| hypothetical protein | RT97_13860 | Not Available | Positive | 2999721 - 3000110 | 14501.2 |
| helicase snf2 | RT97_13865 | Not Available | Negative | 3000207 - 3000587 | 12407.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
