Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exoenzymes regulatory protein aepa precursor | RT97_13760 | Not Available | Negative | 2979960 - 2981732 | 65267.3 |
| hypothetical protein | RT97_13770 | Not Available | Negative | 2983485 - 2983967 | 17878.5 |
| hypothetical protein | RT97_13775 | Not Available | Negative | 2984011 - 2984409 | 14662.4 |
| transcriptional regulator | RT97_13780 | Not Available | Positive | 2984547 - 2985059 | 19349.2 |
| lysr family transcriptional regulator | RT97_13785 | Not Available | Negative | 2985223 - 2986128 | 33252.4 |
| nad(p)h dehydrogenase | RT97_13790 | Not Available | Positive | 2986221 - 2987000 | 28591.1 |
| hypothetical protein | RT97_13795 | Not Available | Negative | 2987001 - 2989097 | 73351.9 |
| abc transporter substrate-binding protein | RT97_13800 | Not Available | Negative | 2989255 - 2990220 | 33648.6 |
| beta-lactamase | RT97_13805 | Not Available | Negative | 2990267 - 2990629 | 13324.2 |
| hypothetical protein | RT97_13810 | Not Available | Negative | 2990626 - 2992017 | 48867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
