Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(3-hydroxyalkanoate) synthetase | RT97_13700 | Not Available | Positive | 2966626 - 2967477 | 31622.4 |
| glucan biosynthesis protein d | RT97_13705 | Not Available | Positive | 2967649 - 2969247 | 59254.2 |
| lysr family transcriptional regulator | RT97_13710 | Not Available | Negative | 2969270 - 2970187 | 33660.5 |
| oxidoreductase | RT97_13715 | Not Available | Positive | 2970312 - 2971067 | 26274.7 |
| peptidylprolyl isomerase | RT97_13720 | Not Available | Negative | 2971183 - 2971593 | 14254.1 |
| ethanolamin permease | RT97_13725 | Not Available | Positive | 2971728 - 2973152 | 50382.1 |
| ethanolamine ammonia-lyase | RT97_13730 | Not Available | Positive | 2973172 - 2974566 | 49786.8 |
| ethanolamine ammonia-lyase | RT97_13735 | Not Available | Positive | 2974563 - 2975348 | 28118.6 |
| amidohydrolase | RT97_13745 | Not Available | Negative | 2977149 - 2977799 | 23261.1 |
| pirin | RT97_13755 | Not Available | Negative | 2978959 - 2979852 | 31871.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
