Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | RT97_13650 | Not Available | Negative | 2953136 - 2958394 | 195309.0 |
| hypothetical protein | RT97_13655 | Not Available | Negative | 2958407 - 2958952 | 20548.5 |
| inner membrane protein yqik | RT97_13660 | Not Available | Negative | 2958949 - 2961135 | 80060.2 |
| ubiquinone biosynthesis protein | RT97_13665 | Not Available | Negative | 2961188 - 2961832 | 22513.6 |
| hypothetical protein | RT97_13670 | Not Available | Negative | 2961867 - 2962226 | 12938.5 |
| phage-shock protein | RT97_13675 | Not Available | Negative | 2962223 - 2962936 | 25941.8 |
| hypothetical protein | RT97_13680 | Not Available | Negative | 2962949 - 2963365 | 14855.8 |
| gcn5 family acetyltransferase | RT97_13685 | Not Available | Positive | 2963505 - 2963936 | 16239.3 |
| lysr family transcriptional regulator | RT97_13690 | Not Available | Negative | 2963946 - 2964887 | 34653.9 |
| methylmalonate-semialdehyde dehydrogenase | RT97_13695 | Not Available | Positive | 2964995 - 2966521 | 54366.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
