Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_13600 | Not Available | Positive | 2944447 - 2945406 | 35546.9 |
| aspartate aminotransferase | RT97_13605 | Not Available | Positive | 2945424 - 2946590 | 41741.4 |
| hypothetical protein | RT97_13610 | Not Available | Negative | 2946595 - 2947662 | 38487.5 |
| succinyl-coa:3-ketoacid-coa transferase | RT97_13615 | Not Available | Negative | 2947750 - 2948388 | 22449.5 |
| succinyl-coa:3-ketoacid-coa transferase | RT97_13620 | Not Available | Negative | 2948390 - 2949202 | 28341.1 |
| luxr family transcriptional regulator | RT97_13625 | Not Available | Positive | 2949305 - 2949871 | 20707.1 |
| hydrolase | RT97_13630 | Not Available | Positive | 2950034 - 2950807 | 27227.2 |
| lactoylglutathione lyase | RT97_13635 | Not Available | Negative | 2951107 - 2951487 | 13851.8 |
| hypothetical protein | RT97_13640 | Not Available | Negative | 2951619 - 2952392 | 28553.7 |
| nuclease | RT97_13645 | Not Available | Negative | 2952392 - 2953081 | 25638.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
