Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin d | RT97_13445 | Not Available | Positive | 2912624 - 2913247 | 22467.7 |
| beta-lactamase | RT97_13450 | Not Available | Negative | 2913257 - 2914141 | 30613.6 |
| arsr family transcriptional regulator | RT97_13455 | Not Available | Positive | 2914311 - 2914649 | 12415.8 |
| atpase | RT97_13460 | Not Available | Positive | 2914703 - 2915212 | 18939.4 |
| glutamine amidotransferase | RT97_13465 | Not Available | Positive | 2915252 - 2915995 | 26232.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | RT97_13470 | Not Available | Positive | 2916102 - 2916740 | 22539.7 |
| glutathione s-transferase | RT97_13475 | Not Available | Positive | 2916769 - 2917350 | 21852.5 |
| phosphoglycerate mutase | RT97_13480 | Not Available | Positive | 2917372 - 2918016 | 22438.9 |
| cytochrome c biogenesis protein | RT97_13485 | Not Available | Positive | 2918058 - 2919020 | 35189.3 |
| merr family transcriptional regulator | RT97_13490 | Not Available | Positive | 2919023 - 2919340 | 11246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
