Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding molybdopterin dehydrogenase | RT97_13395 | Not Available | Negative | 2902200 - 2903195 | 35343.6 |
| oxidoreductase | RT97_13400 | Not Available | Negative | 2903188 - 2903835 | 22308.7 |
| doxx family protein | RT97_13405 | Not Available | Negative | 2903876 - 2904331 | 16603.1 |
| transcriptional regulator | RT97_13410 | Not Available | Positive | 2904452 - 2905360 | 33952.0 |
| c4-dicarboxylate abc transporter substrate-binding protein | RT97_13415 | Not Available | Negative | 2905389 - 2906390 | 36529.2 |
| appr-1-p processing protein | RT97_13420 | Not Available | Positive | 2906709 - 2907236 | 17949.7 |
| dihydroxy-acid dehydratase | RT97_13425 | Not Available | Positive | 2907277 - 2909031 | 61833.6 |
| arac family transcriptional regulator | RT97_13430 | Not Available | Negative | 2909059 - 2909676 | 21513.2 |
| gntr family transcriptional regulator | RT97_13435 | Not Available | Positive | 2909738 - 2911072 | 47253.3 |
| glycerophosphodiester phosphodiesterase | RT97_13440 | Not Available | Positive | 2911160 - 2912599 | 51030.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
