Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_13295 | Not Available | Negative | 2879338 - 2879790 | 16224.5 |
| hypothetical protein | RT97_13300 | Not Available | Negative | 2879787 - 2881082 | 47304.2 |
| iclr family transcriptional regulator | RT97_13305 | Not Available | Negative | 2881136 - 2881978 | 29794.9 |
| fad-dependent oxidoreductase | RT97_13310 | Not Available | Negative | 2882068 - 2883522 | 52068.9 |
| hypothetical protein | RT97_13315 | Not Available | Positive | 2883688 - 2884683 | 34511.5 |
| hypothetical protein | RT97_13320 | Not Available | Positive | 2884680 - 2885684 | 35623.8 |
| alpha/beta hydrolase | RT97_13325 | Not Available | Negative | 2885697 - 2886551 | 30595.6 |
| cytochrome b561 | RT97_13330 | Not Available | Negative | 2886548 - 2887111 | 21201.2 |
| glycosyl transferase | RT97_13335 | Not Available | Positive | 2887273 - 2888769 | 54393.9 |
| aromatic ring-cleaving dioxygenase | RT97_13340 | Not Available | Negative | 2888798 - 2889622 | 29708.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
