Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-transferase | RT97_13185 | Not Available | Negative | 2852972 - 2854180 | 42628.1 |
| gntr family transcriptional regulator | RT97_13190 | Not Available | Negative | 2854306 - 2855199 | 32560.4 |
| (2fe-2s)-binding protein | RT97_13200 | Not Available | Positive | 2856730 - 2857206 | 16821.8 |
| aldehyde dehydrogenase | RT97_13205 | Not Available | Positive | 2857203 - 2859473 | 80963.7 |
| hypothetical protein | RT97_13210 | Not Available | Positive | 2859511 - 2859795 | 10360.0 |
| crp/fnr family transcriptional regulator | RT97_13215 | Not Available | Negative | 2859808 - 2860506 | 25779.3 |
| lysr family transcriptional regulator | RT97_13225 | Not Available | Negative | 2862859 - 2863776 | 33629.6 |
| lipase | RT97_13230 | Not Available | Positive | 2863881 - 2865164 | 44515.0 |
| hypothetical protein | RT97_13235 | Not Available | Positive | 2865242 - 2865469 | 8555.04 |
| aminoglycoside phosphotransferase | RT97_13240 | Not Available | Positive | 2865652 - 2866665 | 37604.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
