Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | RT97_13135 | Not Available | Negative | 2844016 - 2844813 | 27713.3 |
| amidohydrolase | RT97_13140 | Not Available | Negative | 2844846 - 2845709 | 30908.2 |
| lysr family transcriptional regulator | RT97_13145 | Not Available | Positive | 2845802 - 2846701 | 32721.2 |
| carboxymuconolactone decarboxylase | RT97_13150 | Not Available | Negative | 2846705 - 2847220 | 18462.3 |
| 3-oxoacyl-acp reductase | RT97_13155 | Not Available | Negative | 2847263 - 2848045 | 26371.6 |
| 3-oxoacyl-acp reductase | RT97_13160 | Not Available | Negative | 2848051 - 2848851 | 28415.3 |
| laci family transcriptional regulator | RT97_13165 | Not Available | Negative | 2848891 - 2849811 | 31861.3 |
| lysr family transcriptional regulator | RT97_13170 | Not Available | Negative | 2850014 - 2850907 | 32336.0 |
| abc transporter substrate-binding protein | RT97_13175 | Not Available | Negative | 2850956 - 2851948 | 34538.8 |
| hydroxymethylglutaryl-coa lyase | RT97_13180 | Not Available | Negative | 2851992 - 2852975 | 34580.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
