Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_13080 | Not Available | Negative | 2830962 - 2832152 | 41749.8 |
| marr family transcriptional regulator | RT97_13085 | Not Available | Positive | 2832441 - 2832857 | 15457.7 |
| nadph:quinone oxidoreductase | RT97_13090 | Not Available | Negative | 2833128 - 2834129 | 35826.8 |
| tetr family transcriptional regulator | RT97_13095 | Not Available | Negative | 2834228 - 2834833 | 21173.4 |
| signal transduction protein | RT97_13100 | Not Available | Negative | 2834880 - 2835317 | 15737.3 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | RT97_13105 | Not Available | Negative | 2835363 - 2836418 | 37653.8 |
| ferredoxin oxidoreductase | RT97_13110 | Not Available | Negative | 2836415 - 2838265 | 67859.0 |
| glutamate synthase | RT97_13115 | Not Available | Negative | 2838411 - 2840222 | 66439.3 |
| carboxylesterase | RT97_13120 | Not Available | Positive | 2840509 - 2842299 | 62718.7 |
| abc transporter substrate-binding protein | RT97_13130 | Not Available | Negative | 2842992 - 2843975 | 34086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
