Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | RT97_13030 | Not Available | Positive | 2817055 - 2818467 | 50873.7 |
| abc transporter permease | RT97_13035 | Not Available | Positive | 2818788 - 2819570 | 28154.2 |
| sulfonate abc transporter atp-binding protein | RT97_13040 | Not Available | Positive | 2819567 - 2820415 | 31012.9 |
| pbs lyase | RT97_13045 | Not Available | Positive | 2820423 - 2821421 | 34342.7 |
| hypothetical protein | RT97_13050 | Not Available | Positive | 2821411 - 2821725 | 11292.3 |
| hypothetical protein | RT97_13055 | Not Available | Positive | 2824694 - 2824993 | 10905.9 |
| protein kinase | RT97_13060 | Not Available | Negative | 2825049 - 2826800 | 64173.8 |
| formate transporter | RT97_13065 | Not Available | Negative | 2826841 - 2827653 | 28840.1 |
| acyltransferase | RT97_13070 | Not Available | Negative | 2827706 - 2828047 | 11950.3 |
| nitrite reductase | RT97_13075 | Not Available | Negative | 2828069 - 2830597 | 91153.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
