Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | RT97_12980 | Not Available | Negative | 2805090 - 2806673 | 54741.4 |
| carbonic anhydrase | RT97_12985 | Not Available | Negative | 2806859 - 2807590 | 25266.7 |
| hypothetical protein | RT97_12990 | Not Available | Negative | 2807744 - 2808955 | 41840.2 |
| hypothetical protein | RT97_12995 | Not Available | Negative | 2808952 - 2811072 | 75779.4 |
| hypothetical protein | RT97_13000 | Not Available | Negative | 2811187 - 2812257 | 38252.6 |
| hypothetical protein | RT97_13005 | Not Available | Negative | 2812598 - 2813581 | 36236.6 |
| Trna-gly | Not Available | Not Available | Positive | 2813964 - 2814037 | Not Available |
| gntr family transcriptional regulator | RT97_13015 | Not Available | Positive | 2814244 - 2815014 | 28373.2 |
| oxidoreductase | RT97_13020 | Not Available | Positive | 2815011 - 2816747 | 64058.7 |
| 4fe-4s ferredoxin | RT97_13025 | Not Available | Positive | 2816781 - 2817014 | 8543.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
