Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extradiol dioxygenase | RT97_12830 | Not Available | Negative | 2764570 - 2764968 | 14452.8 |
| 3-oxoacyl-acp reductase | RT97_12835 | Not Available | Negative | 2764981 - 2765745 | 26255.4 |
| arac family transcriptional regulator | RT97_12840 | Not Available | Positive | 2765882 - 2766796 | 33236.4 |
| arac family transcriptional regulator | RT97_12845 | Not Available | Negative | 2766784 - 2767707 | 34254.9 |
| short-chain dehydrogenase | RT97_12850 | Not Available | Positive | 2767887 - 2768639 | 25458.4 |
| type vi secretion protein | RT97_12875 | Not Available | Negative | 2775613 - 2777004 | 51654.7 |
| hypothetical protein | RT97_12885 | Not Available | Positive | 2777817 - 2778314 | 17242.7 |
| hypothetical protein | RT97_12890 | Not Available | Negative | 2778340 - 2779170 | 28737.2 |
| hypothetical protein | RT97_12895 | Not Available | Negative | 2779176 - 2780240 | 36805.6 |
| type vi secretion protein | RT97_12900 | Not Available | Negative | 2780261 - 2780653 | 13094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
