Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid dehydrogenase | RT97_12770 | Not Available | Negative | 2747109 - 2748368 | 45119.6 |
| 2-dehydropantoate 2-reductase | RT97_12775 | Not Available | Negative | 2748421 - 2749461 | 36434.4 |
| alanyl-trna synthetase | RT97_12780 | Not Available | Negative | 2749461 - 2752085 | 94700.7 |
| ferritin | RT97_12785 | Not Available | Positive | 2752340 - 2753161 | 32009.9 |
| circadian clock protein kaic | RT97_12790 | Not Available | Positive | 2753319 - 2754821 | 54263.5 |
| histidine kinase | RT97_12795 | Not Available | Positive | 2754845 - 2756389 | 55035.8 |
| hypothetical protein | RT97_12800 | Not Available | Negative | 2756403 - 2756621 | 7671.35 |
| hypothetical protein | RT97_12805 | Not Available | Negative | 2757116 - 2757400 | 10720.7 |
| hypothetical protein | RT97_12820 | Not Available | Positive | 2761280 - 2762434 | 41382.5 |
| hypothetical protein | RT97_12825 | Not Available | Positive | 2762504 - 2764357 | 66148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
