Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | RT97_12720 | Not Available | Negative | 2736656 - 2737627 | 35640.8 |
| aldehyde dehydrogenase | RT97_12725 | Not Available | Negative | 2737779 - 2739257 | 52906.2 |
| aspartate dehydrogenase | RT97_12730 | Not Available | Negative | 2739268 - 2740065 | 26908.9 |
| hypothetical protein | RT97_12735 | Not Available | Negative | 2740086 - 2741777 | 59023.3 |
| short-chain dehydrogenase | RT97_12740 | Not Available | Negative | 2741931 - 2742725 | 27581.2 |
| iclr family transcriptional regulator | RT97_12745 | Not Available | Negative | 2742781 - 2743617 | 30746.9 |
| hydrolase | RT97_12750 | Not Available | Negative | 2743660 - 2744532 | 29936.0 |
| cupin | RT97_12755 | Not Available | Negative | 2744540 - 2745088 | 20500.4 |
| short-chain dehydrogenase | RT97_12760 | Not Available | Negative | 2745114 - 2745929 | 28122.9 |
| abc transporter substrate-binding protein | RT97_12765 | Not Available | Negative | 2745946 - 2746932 | 33376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
