Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | RT97_12620 | Not Available | Positive | 2713172 - 2714092 | 32268.2 |
| hypothetical protein | RT97_12625 | Not Available | Positive | 2714178 - 2714945 | 28617.8 |
| hypothetical protein | RT97_12630 | Not Available | Positive | 2715194 - 2717077 | 69710.7 |
| glyoxalase | RT97_12635 | Not Available | Negative | 2717102 - 2717533 | 15953.0 |
| lysr family transcriptional regulator | RT97_12640 | Not Available | Positive | 2717643 - 2718533 | 31975.1 |
| molybdenum abc transporter substrate-binding protein | RT97_12645 | Not Available | Positive | 2718667 - 2719488 | 28525.3 |
| chemotaxis protein chey | RT97_12650 | Not Available | Negative | 2719535 - 2721781 | 80997.2 |
| chemotaxis protein chey | RT97_12655 | Not Available | Negative | 2721774 - 2722232 | 16735.3 |
| histidine kinase | RT97_12660 | Not Available | Negative | 2722225 - 2724489 | 82250.3 |
| heme oxygenase | RT97_12665 | Not Available | Negative | 2724575 - 2725228 | 23008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
