Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | RT97_12570 | Not Available | Positive | 2701884 - 2703320 | 53937.4 |
| cytochrome c | RT97_12575 | Not Available | Positive | 2703360 - 2704145 | 29232.9 |
| glutathione s-transferase | RT97_12580 | Not Available | Positive | 2704243 - 2704854 | 23753.9 |
| starvation protein b | RT97_12585 | Not Available | Positive | 2704997 - 2705560 | 19685.1 |
| Trna-thr | Not Available | Not Available | Positive | 2705609 - 2705684 | Not Available |
| oxidoreductase | RT97_12595 | Not Available | Negative | 2705761 - 2706567 | 28362.9 |
| short-chain dehydrogenase | RT97_12600 | Not Available | Negative | 2706605 - 2707627 | 36297.1 |
| hypothetical protein | RT97_12605 | Not Available | Positive | 2707909 - 2708186 | 10056.1 |
| abc transporter substrate-binding protein | RT97_12610 | Not Available | Negative | 2708275 - 2709549 | 46223.2 |
| atpase | RT97_12615 | Not Available | Positive | 2709775 - 2713209 | 124440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
