Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | RT97_12365 | Not Available | Positive | 2664125 - 2665603 | 53767.2 |
| toluene abc transporter atp-binding protein | RT97_12370 | Not Available | Positive | 2665702 - 2666529 | 29616.6 |
| abc transporter permease | RT97_12375 | Not Available | Positive | 2666526 - 2667308 | 27791.7 |
| abc transporter substrate-binding protein | RT97_12380 | Not Available | Positive | 2667346 - 2667840 | 17416.8 |
| signal peptide protein | RT97_12390 | Not Available | Positive | 2668781 - 2669437 | 23928.8 |
| anti-sigma-factor antagonist | RT97_12395 | Not Available | Positive | 2669457 - 2669732 | 9541.67 |
| abc transporter atp-binding protein | RT97_12400 | Not Available | Positive | 2669896 - 2670843 | 34664.0 |
| metal-dependent hydrolase | RT97_12405 | Not Available | Positive | 2670840 - 2671604 | 27968.0 |
| bola family transcriptional regulator | RT97_12410 | Not Available | Positive | 2671624 - 2671866 | 9075.78 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | RT97_12415 | Not Available | Positive | 2671907 - 2673196 | 45555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
